Source code for p4util.basislist
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# PSI4: an ab initio quantum chemistry software package
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r"""Module to define a class :py:class:`~BasisFamily` that associates
fitting basis sets to an orbital basis and to provide functions to
query appropriate fitting bases for any orbital basis distributed
with Psi4.
"""
import os
basisfamily_list = []
[docs]class BasisFamily(object):
"""Class to associate with an orbital basis name *ornate*
the gbs file names in which the orbital basis *orbital*
(usually the coded form of *ornate*) and *jkfit*, *rifit*,
and *dualfit* auxiliary bases can be found.
"""
def __init__(self, ornate, orbital=None, jk=None, ri=None, dual=None):
self.ornate = ornate
if orbital is None:
self.orbital = sanitize_basisname(ornate)
else:
self.orbital = sanitize_basisname(orbital)
self.jkfit = jk
self.rifit = ri
self.dualfit = dual
def __str__(self):
text = ''
text += """ ==> %s Family <==\n\n""" % (self.ornate)
text += """ Orbital basis: %s\n""" % (self.orbital)
text += """ JK auxiliary basis: %s\n""" % (self.jkfit)
text += """ MP2 auxiliary basis: %s\n""" % (self.rifit)
text += """ DUAL auxiliary basis: %s\n""" % (self.dualfit)
text += """\n"""
return text
[docs] def name(self):
"""Function to return the ornate name of the orbital basis,
e.g., 6-311++G** for 6-311ppgss.
"""
return self.ornate
[docs] def add_jkfit(self, fit):
"""Function to add basis *fit* as associated fitting basis
member *jkfit* to a BasisFamily object.
"""
self.jkfit = sanitize_basisname(fit)
[docs] def add_rifit(self, fit):
"""Function to add basis *fit* as associated fitting basis
member *rifit* to a BasisFamily object.
"""
self.rifit = sanitize_basisname(fit)
[docs] def add_dualfit(self, fit):
"""Function to add basis *fit* as associated helper basis
member *dualfit* to a BasisFamily object.
"""
self.dualfit = sanitize_basisname(fit)
[docs]def sanitize_basisname(name):
"""Function to return *name* in coded form, stripped of
characters that confuse filenames, characters into lowercase,
``+`` into ``p``, ``*`` into ``s``, and ``(``, ``)``, & ``,``
into ``_``.
"""
temp = name.lower()
temp = temp.replace('+', 'p')
temp = temp.replace('*', 's')
temp = temp.replace('(', '_')
temp = temp.replace(')', '_')
temp = temp.replace(',', '_')
return temp
[docs]def load_basis_families():
"""Function to load into the array ``basisfamily_list``
BasisFamily objects for all Psi4's standard installed bases.
"""
from basislistdunning import load_basfam_dunning
from basislistother import load_basfam_other
if len(basisfamily_list) == 0:
load_basfam_dunning()
load_basfam_other()
return basisfamily_list
[docs]def print_basis_families():
"""Function to print to the output file a formatted summary
of all the BasisFamily objects in ``basisfamily_list``, by
default all Psi4's standard installed bases.
"""
basisfamily_list = load_basis_families()
text = ''
for fam in basisfamily_list:
text += '%s' % (fam)
return text
[docs]def corresponding_orbital(name):
"""Function to validate if the orbital basis *name* in coded or
ornate form is in Psi4's standard installed bases list. ``None``
is returned if the orbital basis is not found.
"""
basisfamily_list = load_basis_families()
for fam in basisfamily_list:
if sanitize_basisname(fam.ornate) == sanitize_basisname(name):
return fam.ornate
return None
[docs]def corresponding_jkfit(name):
"""Function to return an appropriate JK fitting basis for
the orbital basis *name* in coded or ornate form. ``None``
is returned if no fitting basis is defined or if the
orbital basis is not found.
"""
basisfamily_list = load_basis_families()
for fam in basisfamily_list:
if sanitize_basisname(fam.ornate) == sanitize_basisname(name):
return fam.jkfit
return None
[docs]def corresponding_rifit(name):
"""Function to return an appropriate RI fitting basis for
the orbital basis *name* in coded or ornate form. ``None``
is returned if no fitting basis is defined or if the
orbital basis is not found.
"""
basisfamily_list = load_basis_families()
for fam in basisfamily_list:
if sanitize_basisname(fam.ornate) == sanitize_basisname(name):
return fam.rifit
return None
[docs]def corresponding_dualfit(name):
"""Function to return an appropriate DUAL helper basis for
the orbital basis *name* in coded or ornate form. ``None``
is returned if no fitting basis is defined or if the
orbital basis is not found.
"""
basisfamily_list = load_basis_families()
for fam in basisfamily_list:
if sanitize_basisname(fam.ornate) == sanitize_basisname(name):
return fam.dualfit
return None